9.0 Reading and Storing Data

(Win version)

< 8.0 | 9.0 | 9.1 >

Now that the program can build trees, the next step is to read sequence data from a Nexus-formatted file and store the data patterns compactly.

Step Title Description
Step 9.1 Create the DataType and GeneticCode classes

Create two classes needed for storing command line arguments that define partition subsets.

Step 9.2 Create the Partition class

Create the class that interprets user specification and storage of partition information.

Step 9.3 Create the Data class

Create a class that can read sequence data files and store the data compactly.

Step 9.4 Test Reading and Storing Data

Test the Data class by reading and storing data from a nexus-formatted data file.

< 8.0 | 9.0 | 9.1 >